B-DNA 34 base pairs at 3.38 Å rise and 36° twist. Built model.
Service 04
Bioinformatics and genomics
From raw reads to results you can publish: genome assembly and annotation, NCBI submission, RNA-seq and differential expression, sequence analysis, protein modelling and primer design. Typically 3 to 5 days.
What we do
The work, step by step
- 01
Whole-genome sequencing analysis
Quality control, assembly and annotation of bacterial genomes, ready for submission.
- 02
NCBI submission
GenBank and sequence submissions prepared and filed, as the founder has done for his own bacterial isolates.
- 03
RNA-seq and transcriptomics
From raw sequencing data through differential gene expression and functional interpretation.
- 04
Sequence analysis and phylogenetics
Sequence retrieval from NCBI and Ensembl, BLAST, alignments and phylogenetic trees.
- 05
Protein modelling
Structure prediction and model validation when no experimental structure exists.
- 06
Primer design
In-silico primer design, including DNA methylation primers verified with the UCSC Genome Browser.
You receive
- Processed data and result tables
- Publication-ready figures
- Accession numbers for NCBI submissions
- A written methods and results section
Typical turnaround
3–5 days depending on the size of the data set
Counted from the day we receive your files. Larger studies get their own timeline with the quote. All turnaround times
Tools
Standard genome assembly and annotation pipelines, RNA-seq and differential expression tools, NCBI, Ensembl, BLAST, the UCSC Genome Browser and Biopython.
Who works on it
Diderul Islam · Tahira Rashid, with the BioInfoX research team. We take full responsibility for every analysis we perform.
Start
Send us your system and your question.
Structures, sequences or data, your research question and your deadline. We reply with the scope, the timeline and a quote.